IL_8VVV_079

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGCC*GGAAUC

Length

12 nucleotides

Bulged bases

8VVV|1|5|G|1981

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|5|G|1979
8VVV|1|5|U|1980
8VVV|1|5|G|1981
8VVV|1|5|G|1982
8VVV|1|5|C|1983
8VVV|1|5|C|1984
*
8VVV|1|5|G|1994
8VVV|1|5|G|1995
8VVV|1|5|A|1996
8VVV|1|5|A|1997
8VVV|1|5|U|1998
8VVV|1|5|C|1999

Current chains

Chain 5

28S rRNA

Nearby chains

Chain I

L10

Chain s

uL10

Chain t

eL11