IL_8VVV_098
3D structure
- PDB id
- 8VVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CGG
- Length
- 5 nucleotides
- Bulged bases
- 8VVV|1|5|G|2717
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVV_098 not in the Motif Atlas
- Homologous match to IL_8GLP_102
- Geometric discrepancy: 0.229
- The information below is about IL_8GLP_102
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 83
Unit IDs
8VVV|1|5|C|2710
8VVV|1|5|G|2711
*
8VVV|1|5|C|2716
8VVV|1|5|G|2717
8VVV|1|5|G|2718
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain R
- eL19
- Chain U
- eL22
- Chain X
- uL23
Coloring options: