IL_8VVV_129

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|5|G|4406
8VVV|1|5|G|4407
8VVV|1|5|C|4408
8VVV|1|5|PSU|4409
8VVV|1|5|U|4410
8VVV|1|5|G|4411
*
8VVV|1|5|U|4445
8VVV|1|5|G|4446
8VVV|1|5|A|4447
8VVV|1|5|PSU|4448
8VVV|1|5|C|4449
8VVV|1|5|C|4450

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain I

L10

Chain b

eL29