IL_8VVV_211

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|9|G|807
8VVV|1|9|A|808
8VVV|1|9|A|809
8VVV|1|9|A|810
8VVV|1|9|A|811
8VVV|1|9|A|812
8VVV|1|9|A|813
8VVV|1|9|U|814
8VVV|1|9|U|815
*
8VVV|1|9|A|849
8VVV|1|9|C|850
8VVV|1|9|C|851
8VVV|1|9|G|852
8VVV|1|9|C|853
8VVV|1|9|A|854
8VVV|1|9|G|855
8VVV|1|9|C|856

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

eS4

Chain JJ

uS4

Chain LL

uS17

Chain WW

uS8