IL_8VVV_233

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

8VVV|1|9|G|1285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|9|G|1281
8VVV|1|9|A|1282
8VVV|1|9|C|1283
8VVV|1|9|A|1284
8VVV|1|9|G|1285
8VVV|1|9|G|1286
8VVV|1|9|A|1287
8VVV|1|9|U|1288
8VVV|1|9|U|1289
8VVV|1|9|G|1290
*
8VVV|1|9|C|1309
8VVV|1|9|U|1310
8VVV|1|9|C|1311
8VVV|1|9|G|1312
8VVV|1|9|A|1313
8VVV|1|9|U|1314
8VVV|1|9|U|1315
8VVV|1|9|C|1316

Current chains

Chain 9

18S rRNA

Nearby chains

Chain KK

eS10

Chain MM

eS12

Chain dd

uS14

Chain ff

eS31