IL_8VVV_245

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CG*CGG

Length

5 nucleotides

Bulged bases

8VVV|1|9|G|1428

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8VVV_245 not in the Motif Atlas

Geometric match to IL_8ZA0_002

Geometric discrepancy: 0.3277

The information below is about IL_8ZA0_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

8VVV|1|9|C|1412
8VVV|1|9|G|1413
*
8VVV|1|9|C|1427
8VVV|1|9|G|1428
8VVV|1|9|G|1429

Current chains

Chain 9

18S rRNA

Nearby chains

Chain QQ

uS9

Chain TT

eS19