IL_8VVV_250

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|9|G|1604
8VVV|1|9|G|1605
8VVV|1|9|G|1606
8VVV|1|9|A|1607
8VVV|1|9|U|1608
8VVV|1|9|C|1609
8VVV|1|9|G|1610
*
8VVV|1|9|C|1629
8VVV|1|9|A|1630
8VVV|1|9|U|1631
8VVV|1|9|G|1632
8VVV|1|9|A|1633
8VVV|1|9|A|1634
8VVV|1|9|C|1635

Current chains

Chain 9

18S rRNA

Nearby chains

Chain SS

uS13

Chain TT

eS19