IL_8VWQ_163
3D structure
- PDB id
- 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUGC*GAACUC
- Length
- 11 nucleotides
- Bulged bases
- 8VWQ|1|2|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VWQ_163 not in the Motif Atlas
- Geometric match to IL_5J7L_051
- Geometric discrepancy: 0.1375
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8VWQ|1|2|G|1124
8VWQ|1|2|U|1125
8VWQ|1|2|U|1126
8VWQ|1|2|G|1127
8VWQ|1|2|C|1128
*
8VWQ|1|2|G|1144
8VWQ|1|2|A|1145
8VWQ|1|2|A|1146
8VWQ|1|2|C|1147
8VWQ|1|2|U|1148
8VWQ|1|2|C|1149
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain n
- Small ribosomal subunit protein uS9
- Chain o
- 30S ribosomal protein S10
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