IL_8VWQ_181
3D structure
- PDB id
- 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VWQ_181 not in the Motif Atlas
- Geometric match to IL_5J7L_356
- Geometric discrepancy: 0.0974
- The information below is about IL_5J7L_356
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.4
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
8VWQ|1|3|G|23
8VWQ|1|3|G|24
8VWQ|1|3|U|25
8VWQ|1|3|C|26
8VWQ|1|3|C|27
8VWQ|1|3|C|28
*
8VWQ|1|3|G|56
8VWQ|1|3|A|57
8VWQ|1|3|A|58
8VWQ|1|3|A|59
8VWQ|1|3|C|60
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
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