IL_8W2N_042
3D structure
- PDB id
- 8W2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 8W2N|1|1|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8W2N_042 not in the Motif Atlas
- Geometric match to IL_5J7L_288
- Geometric discrepancy: 0.0894
- The information below is about IL_5J7L_288
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.9
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 27
Unit IDs
8W2N|1|1|C|1208
8W2N|1|1|U|1209
8W2N|1|1|G|1210
8W2N|1|1|C|1211
8W2N|1|1|G|1212
8W2N|1|1|A|1213
8W2N|1|1|A|1214
8W2N|1|1|G|1215
*
8W2N|1|1|U|1234
8W2N|1|1|G|1235
8W2N|1|1|G|1236
8W2N|1|1|A|1237
8W2N|1|1|G|1238
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
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