IL_8W2N_177
3D structure
- PDB id
- 8W2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8W2N_177 not in the Motif Atlas
- Geometric match to IL_3GM7_005
- Geometric discrepancy: 0.1297
- The information below is about IL_3GM7_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
8W2N|1|5|G|29
8W2N|1|5|U|30
8W2N|1|5|C|31
*
8W2N|1|5|G|39
8W2N|1|5|U|40
8W2N|1|5|C|41
Current chains
- Chain 5
- tRNA^ProL (GGG)
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 6
- Elongation factor P
- Chain n
- 30S ribosomal protein S9
- Chain r
- 30S ribosomal protein S13
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