IL_8WHY_137

3D structure

PDB id

8WHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGGGAAACG*CUAAGCCU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WHY|1|B|A|22
8WHY|1|B|G|23
8WHY|1|B|G|24
8WHY|1|B|G|25
8WHY|1|B|A|26
8WHY|1|B|A|27
8WHY|1|B|A|28
8WHY|1|B|C|29
8WHY|1|B|G|30
*
8WHY|1|B|C|56
8WHY|1|B|U|57
8WHY|1|B|A|58
8WHY|1|B|A|59
8WHY|1|B|G|60
8WHY|1|B|C|61
8WHY|1|B|C|62
8WHY|1|B|U|63

Current chains

Chain B

5S rRNA

Nearby chains

Chain H

50S ribosomal protein L5

Chain R

50S ribosomal protein L18