IL_8WI7_115
3D structure
- PDB id
- 8WI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAUAC*GAUAG
- Length
- 10 nucleotides
- Bulged bases
- 8WI7|1|A|U|2913, 8WI7|1|A|A|2914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WI7_115 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.2235
- The information below is about IL_4WF9_102
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
8WI7|1|A|U|2911
8WI7|1|A|A|2912
8WI7|1|A|U|2913
8WI7|1|A|A|2914
8WI7|1|A|C|2915
*
8WI7|1|A|G|2942
8WI7|1|A|A|2943
8WI7|1|A|U|2944
8WI7|1|A|A|2945
8WI7|1|A|G|2946
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L3
- Chain Q
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L19
Coloring options: