IL_8WI7_190
3D structure
- PDB id
- 8WI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WI7_190 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.2454
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_97631.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
8WI7|1|a|C|1413
8WI7|1|a|C|1414
8WI7|1|a|G|1415
8WI7|1|a|A|1416
8WI7|1|a|A|1417
8WI7|1|a|G|1418
*
8WI7|1|a|C|1450
8WI7|1|a|G|1451
8WI7|1|a|A|1452
8WI7|1|a|A|1453
8WI7|1|a|G|1454
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- 50S ribosomal protein L19
- Chain u
- 30S ribosomal protein S20
Coloring options: