IL_8WIB_060

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAG*UGAUC

Length

9 nucleotides

Bulged bases

8WIB|1|A|U|1774

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WIB_060 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.1535

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8WIB|1|A|G|1658
8WIB|1|A|U|1659
8WIB|1|A|A|1660
8WIB|1|A|G|1661
*
8WIB|1|A|U|1771
8WIB|1|A|G|1772
8WIB|1|A|A|1773
8WIB|1|A|U|1774
8WIB|1|A|C|1775

Current chains

Chain A

23S rRNA

Nearby chains