IL_8WIB_061

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

8WIB|1|A|U|1745

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WIB_061 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.1002

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8WIB|1|A|U|1689
8WIB|1|A|A|1690
8WIB|1|A|A|1691
8WIB|1|A|G|1692
*
8WIB|1|A|U|1742
8WIB|1|A|G|1743
8WIB|1|A|A|1744
8WIB|1|A|U|1745
8WIB|1|A|G|1746

Current chains

Chain A

23S rRNA

Nearby chains