IL_8WID_055
3D structure
- PDB id
- 8WID (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, E- tRNA and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGGAUC*GUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WID_055 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.0993
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
8WID|1|a|C|1285
8WID|1|a|G|1286
8WID|1|a|G|1287
8WID|1|a|A|1288
8WID|1|a|U|1289
8WID|1|a|C|1290
*
8WID|1|a|G|1311
8WID|1|a|U|1312
8WID|1|a|G|1313
8WID|1|a|A|1314
8WID|1|a|A|1315
8WID|1|a|G|1316
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain n
- 30S ribosomal protein S13
Coloring options: