IL_8WRC_019

3D structure

PDB id

8WRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.59 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WRC_019 not in the Motif Atlas

Homologous match to IL_4LFB_019

Geometric discrepancy: 0.1635

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

8WRC|1|A|G|450
8WRC|1|A|A|451
8WRC|1|A|A|452
8WRC|1|A|A|453
8WRC|1|A|C|454
8WRC|1|A|C|455
*
8WRC|1|A|G|477
8WRC|1|A|A|478
8WRC|1|A|C|479
8WRC|1|A|U|480
8WRC|1|A|G|481
8WRC|1|A|A|482
8WRC|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16