IL_8WRC_057

3D structure

PDB id

8WRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.59 Å

Loop

Sequence

CGGGAG*CAG

Length

9 nucleotides

Bulged bases

8WRC|1|A|G|1442, 8WRC|1|A|G|1443, 8WRC|1|A|A|1446

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WRC_057 not in the Motif Atlas

Homologous match to IL_4LFB_064

Geometric discrepancy: 0.3763

The information below is about IL_4LFB_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93811.1

Basepair signature

cWW-tHS-L-R-cWW-L

Number of instances in this motif group

3

Unit IDs

8WRC|1|A|C|1440
8WRC|1|A|G|1441
8WRC|1|A|G|1442
8WRC|1|A|G|1443
8WRC|1|A|A|1446
8WRC|1|A|G|1447
*
8WRC|1|A|C|1459
8WRC|1|A|A|1460
8WRC|1|A|G|1461

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20