IL_8WV1_032

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GCUAAGUG*CUUAAGC

Length

15 nucleotides

Bulged bases

8WV1|1|A|U|1187, 8WV1|1|A|A|1189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|G|1063
8WV1|1|A|C|1064
8WV1|1|A|U|1065
8WV1|1|A|A|1066
8WV1|1|A|A|1067
8WV1|1|A|G|1068
8WV1|1|A|U|1069
8WV1|1|A|G|1070
*
8WV1|1|A|C|1185
8WV1|1|A|U|1186
8WV1|1|A|U|1187
8WV1|1|A|A|1188
8WV1|1|A|A|1189
8WV1|1|A|G|1190
8WV1|1|A|C|1191

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain B

5S ribosomal RNA; 5S rRNA

Chain G

50S ribosomal protein L6

Chain I

50S ribosomal protein L13