IL_8WV1_075

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

UGGGAG*CGCCGGUGAAAUACCA

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|U|2144
8WV1|1|A|G|2145
8WV1|1|A|G|2146
8WV1|1|A|G|2147
8WV1|1|A|A|2148
8WV1|1|A|G|2149
*
8WV1|1|A|C|2183
8WV1|1|A|G|2184
8WV1|1|A|C|2185
8WV1|1|A|C|2186
8WV1|1|A|G|2187
8WV1|1|A|G|2188
8WV1|1|A|U|2189
8WV1|1|A|G|2190
8WV1|1|A|A|2191
8WV1|1|A|A|2192
8WV1|1|A|A|2193
8WV1|1|A|U|2194
8WV1|1|A|A|2195
8WV1|1|A|C|2196
8WV1|1|A|C|2197
8WV1|1|A|A|2198

Current chains

Chain A

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L33

Chain f

50S ribosomal protein L5