IL_8WV1_077

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

CAGGC*GCCGGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|C|2309
8WV1|1|A|A|2310
8WV1|1|A|G|2311
8WV1|1|A|G|2312
8WV1|1|A|C|2313
*
8WV1|1|A|G|2327
8WV1|1|A|C|2328
8WV1|1|A|C|2329
8WV1|1|A|G|2330
8WV1|1|A|G|2331
8WV1|1|A|A|2332
8WV1|1|A|G|2333

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain F

50S ribosomal protein L5

Chain N

50S ribosomal protein L18

Chain V

Large ribosomal subunit protein bL27