IL_8WV1_095
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WV1_095 not in the Motif Atlas
- Homologous match to IL_9DFE_109
- Geometric discrepancy: 0.1783
- The information below is about IL_9DFE_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
8WV1|1|A|U|2857
8WV1|1|A|G|2858
8WV1|1|A|U|2859
8WV1|1|A|A|2860
8WV1|1|A|A|2861
8WV1|1|A|G|2862
*
8WV1|1|A|U|2875
8WV1|1|A|U|2876
8WV1|1|A|G|2877
8WV1|1|A|A|2878
8WV1|1|A|G|2879
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L17
- Chain O
- 50S ribosomal protein L19
Coloring options: