IL_8WV1_173

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GACGA*UCUAUC

Length

11 nucleotides

Bulged bases

8WV1|1|a|C|2077, 8WV1|1|a|C|2624, 8WV1|1|a|U|2625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|a|G|2075
8WV1|1|a|A|2076
8WV1|1|a|C|2077
8WV1|1|a|G|2078
8WV1|1|a|A|2079
*
8WV1|1|a|U|2623
8WV1|1|a|C|2624
8WV1|1|a|U|2625
8WV1|1|a|A|2626
8WV1|1|a|U|2627
8WV1|1|a|C|2628

Current chains

Chain a

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L32

Chain d

50S ribosomal protein L3

Chain r

50S ribosomal protein L22