IL_8WV1_194
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CCUCU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 8WV1|1|a|U|2739
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WV1_194 not in the Motif Atlas
- Homologous match to IL_9DFE_103
- Geometric discrepancy: 0.1721
- The information below is about IL_9DFE_103
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
8WV1|1|a|C|2692
8WV1|1|a|C|2693
8WV1|1|a|U|2694
8WV1|1|a|C|2695
8WV1|1|a|U|2696
*
8WV1|1|a|A|2738
8WV1|1|a|U|2739
8WV1|1|a|G|2740
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain j
- Large ribosomal subunit protein uL14
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
Coloring options: