IL_8WV1_195

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GGUUUCC*GGUAGCC

Length

14 nucleotides

Bulged bases

8WV1|1|a|U|2701, 8WV1|1|a|C|2702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|a|G|2697
8WV1|1|a|G|2698
8WV1|1|a|U|2699
8WV1|1|a|U|2700
8WV1|1|a|U|2701
8WV1|1|a|C|2702
8WV1|1|a|C|2703
*
8WV1|1|a|G|2731
8WV1|1|a|G|2732
8WV1|1|a|U|2733
8WV1|1|a|A|2734
8WV1|1|a|G|2735
8WV1|1|a|C|2736
8WV1|1|a|C|2737

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain j

Large ribosomal subunit protein uL14

Chain m

50S ribosomal protein L17

Chain o

50S ribosomal protein L19