IL_8WV1_243

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GGAAG*CCC

Length

8 nucleotides

Bulged bases

8WV1|1|a|A|1878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|a|G|1876
8WV1|1|a|G|1877
8WV1|1|a|A|1878
8WV1|1|a|A|1879
8WV1|1|a|G|1880
*
8WV1|1|a|C|1915
8WV1|1|a|C|1916
8WV1|1|a|C|1917

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain c

50S ribosomal protein L2