IL_8XT3_021

3D structure

PDB id

8XT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCCG*CUCAUAAG

Length

13 nucleotides

Bulged bases

8XT3|1|L1|C|661, 8XT3|1|L1|A|774, 8XT3|1|L1|A|776

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT3|1|L1|C|659
8XT3|1|L1|U|660
8XT3|1|L1|C|661
8XT3|1|L1|C|662
8XT3|1|L1|G|663
*
8XT3|1|L1|C|771
8XT3|1|L1|U|772
8XT3|1|L1|C|773
8XT3|1|L1|A|774
8XT3|1|L1|U|775
8XT3|1|L1|A|776
8XT3|1|L1|A|777
8XT3|1|L1|G|778

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LQ

Large ribosomal subunit protein bL17m

Chain Sf

Large ribosomal subunit protein mL65