IL_8XT3_023

3D structure

PDB id

8XT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAAAUCUUA*UUCAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT3|1|L1|G|808
8XT3|1|L1|C|809
8XT3|1|L1|A|810
8XT3|1|L1|A|811
8XT3|1|L1|A|812
8XT3|1|L1|U|813
8XT3|1|L1|C|814
8XT3|1|L1|U|815
8XT3|1|L1|U|816
8XT3|1|L1|A|817
*
8XT3|1|L1|U|978
8XT3|1|L1|U|979
8XT3|1|L1|C|980
8XT3|1|L1|A|981
8XT3|1|L1|G|982
8XT3|1|L1|C|983

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL3m

Chain LN

Large ribosomal subunit protein uL14m

Chain LS

Large ribosomal subunit protein bL19m