IL_8XT3_028

3D structure

PDB id

8XT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUAAUCACUUG*CCUG

Length

16 nucleotides

Bulged bases

8XT3|1|L1|A|931, 8XT3|1|L1|U|937, 8XT3|1|L1|U|956

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT3|1|L1|C|927
8XT3|1|L1|A|928
8XT3|1|L1|U|929
8XT3|1|L1|A|930
8XT3|1|L1|A|931
8XT3|1|L1|U|932
8XT3|1|L1|C|933
8XT3|1|L1|A|934
8XT3|1|L1|C|935
8XT3|1|L1|U|936
8XT3|1|L1|U|937
8XT3|1|L1|G|938
*
8XT3|1|L1|C|954
8XT3|1|L1|C|955
8XT3|1|L1|U|956
8XT3|1|L1|G|957

Current chains

Chain L1

16s rRNA

Nearby chains