IL_8XT3_052

3D structure

PDB id

8XT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCCA*UACCCUCAC

Length

14 nucleotides

Bulged bases

8XT3|1|L1|C|744, 8XT3|1|L1|C|745

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT3|1|L1|G|707
8XT3|1|L1|C|708
8XT3|1|L1|C|709
8XT3|1|L1|C|710
8XT3|1|L1|A|711
*
8XT3|1|L1|U|741
8XT3|1|L1|A|742
8XT3|1|L1|C|743
8XT3|1|L1|C|744
8XT3|1|L1|C|745
8XT3|1|L1|U|746
8XT3|1|L1|C|747
8XT3|1|L1|A|748
8XT3|1|L1|C|749

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LW

Large ribosomal subunit protein uL23m

Chain Lk

Large ribosomal subunit protein mL37

Chain Lo

Large ribosomal subunit protein mL41

Chain Sf

Large ribosomal subunit protein mL65