IL_8XT3_053

3D structure

PDB id

8XT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

8XT3|1|L1|C|723, 8XT3|1|L1|A|736

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT3|1|L1|A|714
8XT3|1|L1|U|715
8XT3|1|L1|C|716
8XT3|1|L1|U|717
8XT3|1|L1|A|718
8XT3|1|L1|C|719
8XT3|1|L1|A|720
8XT3|1|L1|A|721
8XT3|1|L1|U|722
8XT3|1|L1|C|723
8XT3|1|L1|A|724
8XT3|1|L1|A|725
8XT3|1|L1|C|726
8XT3|1|L1|C|727
8XT3|1|L1|A|728
8XT3|1|L1|A|729
8XT3|1|L1|C|730
*
8XT3|1|L1|G|733
8XT3|1|L1|U|734
8XT3|1|L1|C|735
8XT3|1|L1|A|736
8XT3|1|L1|U|737
8XT3|1|L1|U|738

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL2m

Chain Lk

Large ribosomal subunit protein mL37

Chain Sf

Large ribosomal subunit protein mL65