IL_8XU8_152
3D structure
- PDB id
- 8XU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 8XU8|1|A|U|1629, 8XU8|1|A|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8XU8_152 not in the Motif Atlas
- Homologous match to IL_8P9A_294
- Geometric discrepancy: 0.3437
- The information below is about IL_8P9A_294
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37467.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8XU8|1|A|U|1627
8XU8|1|A|C|1628
8XU8|1|A|U|1629
8XU8|1|A|U|1630
8XU8|1|A|C|1631
*
8XU8|1|A|G|1811
8XU8|1|A|G|1812
8XU8|1|A|A|1813
8XU8|1|A|A|1814
8XU8|1|A|U|1815
8XU8|1|A|A|1816
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain b
- Large ribosomal subunit protein eL27A
Coloring options: