IL_8XU8_157
3D structure
- PDB id
- 8XU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 8XU8|1|A|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8XU8_157 not in the Motif Atlas
- Homologous match to IL_8C3A_077
- Geometric discrepancy: 0.1266
- The information below is about IL_8C3A_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8XU8|1|A|U|1694
8XU8|1|A|U|1695
8XU8|1|A|A|1696
8XU8|1|A|A|1697
8XU8|1|A|C|1698
*
8XU8|1|A|G|1747
8XU8|1|A|G|1748
8XU8|1|A|A|1749
8XU8|1|A|A|1750
8XU8|1|A|G|1751
8XU8|1|A|A|1752
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain i
- Large ribosomal subunit protein eL34A
- Chain m
- Large ribosomal subunit protein eL38
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