IL_8XZ3_020
3D structure
- PDB id
- 8XZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8XZ3_020 not in the Motif Atlas
- Homologous match to IL_8VTW_015
- Geometric discrepancy: 0.186
- The information below is about IL_8VTW_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66798.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
8XZ3|1|A|U|699
8XZ3|1|A|U|700
8XZ3|1|A|A|701
8XZ3|1|A|A|702
8XZ3|1|A|C|703
*
8XZ3|1|A|G|712
8XZ3|1|A|G|713
8XZ3|1|A|U|714
8XZ3|1|A|A|715
8XZ3|1|A|G|716
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL4
- Chain M
- Large ribosomal subunit protein uL15
Coloring options: