IL_8Y0U_141
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 8Y0U|1|C2|A|468
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Y0U_141 not in the Motif Atlas
- Geometric match to IL_4V88_386
- Geometric discrepancy: 0.1749
- The information below is about IL_4V88_386
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
8Y0U|1|C2|U|37
8Y0U|1|C2|C|38
8Y0U|1|C2|A|39
8Y0U|1|C2|A|40
8Y0U|1|C2|A|41
*
8Y0U|1|C2|U|466
8Y0U|1|C2|G|467
8Y0U|1|C2|A|468
8Y0U|1|C2|C|469
8Y0U|1|C2|A|470
8Y0U|1|C2|A|471
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4-A
- Chain SJ
- 40S ribosomal protein S9-A
- Chain SY
- 40S ribosomal protein S24-A
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