3D structure

PDB id
8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
Description
dormant ribosome with STM1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.59 Å

Loop

Sequence
CAG*UUAG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Y0U|1|C1|C|969
8Y0U|1|C1|A|970
8Y0U|1|C1|G|971
*
8Y0U|1|C1|U|1110
8Y0U|1|C1|U|1111
8Y0U|1|C1|A|1112
8Y0U|1|C1|G|1113

Current chains

Chain C1
25S rRNA

Nearby chains

Chain LL
Large ribosomal subunit protein eL13A
Chain LQ
Large ribosomal subunit protein eL18A
Chain LT
Large ribosomal subunit protein eL21A
Chain La
Large ribosomal subunit protein uL15
Chain Lb
Large ribosomal subunit protein eL29

Coloring options:

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