IL_8Y0W_124
3D structure
- PDB id
- 8Y0W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with eIF5A, eEF2 and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Y0W_124 not in the Motif Atlas
- Homologous match to IL_8C3A_093
- Geometric discrepancy: 0.1679
- The information below is about IL_8C3A_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
8Y0W|1|L5|U|3715
8Y0W|1|L5|C|3716
8Y0W|1|L5|A|3717
8Y0W|1|L5|A|3718
8Y0W|1|L5|A|3719
8Y0W|1|L5|G|3720
8Y0W|1|L5|U|3721
*
8Y0W|1|L5|A|3732
8Y0W|1|L5|A|3733
8Y0W|1|L5|U|3734
8Y0W|1|L5|G|3735
8Y0W|1|L5|A|3736
8Y0W|1|L5|A|3737
8Y0W|1|L5|G|3738
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain Li
- 60S ribosomal protein L36
- Chain Lo
- 60S ribosomal protein L36a
- Chain Lz
- 60S ribosomal protein L10a
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