IL_8Y5Q_119
3D structure
- PDB id
- 8Y5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli transcription translation coupling complex in TTC-B state 4 (subclass 2) containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAUAACUAC*GUAGCUAAUAC
- Length
- 21 nucleotides
- Bulged bases
- 8Y5Q|1|3|U|173
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y5Q|1|3|G|147
8Y5Q|1|3|G|148
8Y5Q|1|3|A|149
8Y5Q|1|3|U|150
8Y5Q|1|3|A|151
8Y5Q|1|3|A|152
8Y5Q|1|3|C|153
8Y5Q|1|3|U|154
8Y5Q|1|3|A|155
8Y5Q|1|3|C|156
*
8Y5Q|1|3|G|165
8Y5Q|1|3|U|166
8Y5Q|1|3|A|167
8Y5Q|1|3|G|168
8Y5Q|1|3|C|169
8Y5Q|1|3|U|170
8Y5Q|1|3|A|171
8Y5Q|1|3|A|172
8Y5Q|1|3|U|173
8Y5Q|1|3|A|174
8Y5Q|1|3|C|175
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain Y
- 30S ribosomal protein S20
Coloring options: