IL_8YLR_181

3D structure

PDB id

8YLR (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GACAU*AUAGUU

Length

11 nucleotides

Bulged bases

8YLR|1|A|A|2502

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8YLR|1|A|G|2442
8YLR|1|A|A|2443
8YLR|1|A|C|2444
8YLR|1|A|A|2445
8YLR|1|A|U|2446
*
8YLR|1|A|A|2500
8YLR|1|A|U|2501
8YLR|1|A|A|2502
8YLR|1|A|G|2503
8YLR|1|A|U|2504
8YLR|1|A|U|2505

Current chains

Chain A

25S rRNA

Nearby chains

Chain k

Large ribosomal subunit protein eL36A