IL_8YLR_192

3D structure

PDB id

8YLR (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGG*CUUUUU

Length

10 nucleotides

Bulged bases

8YLR|1|A|U|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8YLR|1|A|G|2828
8YLR|1|A|U|2829
8YLR|1|A|G|2830
8YLR|1|A|G|2831
*
8YLR|1|A|C|2857
8YLR|1|A|U|2858
8YLR|1|A|U|2859
8YLR|1|A|U|2860
8YLR|1|A|U|2861
8YLR|1|A|U|2862

Current chains

Chain A

25S rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL3

Chain L

Large ribosomal subunit protein uL16

Chain t

Transfer RNA; tRNA