IL_8ZEJ_020

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GGAGGAAGG*UUGACGUUAC

Length

19 nucleotides

Bulged bases

8ZEJ|1|A|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|A|G|446
8ZEJ|1|A|G|447
8ZEJ|1|A|A|448
8ZEJ|1|A|G|449
8ZEJ|1|A|G|450
8ZEJ|1|A|A|451
8ZEJ|1|A|A|452
8ZEJ|1|A|G|453
8ZEJ|1|A|G|454
*
8ZEJ|1|A|U|479
8ZEJ|1|A|U|480
8ZEJ|1|A|G|481
8ZEJ|1|A|A|482
8ZEJ|1|A|C|483
8ZEJ|1|A|G|484
8ZEJ|1|A|U|485
8ZEJ|1|A|U|486
8ZEJ|1|A|A|487
8ZEJ|1|A|C|488

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain P

30S ribosomal protein S16