IL_8ZEJ_058
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZEJ_058 not in the Motif Atlas
- Geometric match to IL_8CRE_468
- Geometric discrepancy: 0.0695
- The information below is about IL_8CRE_468
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
8ZEJ|1|A|G|1405
8ZEJ|1|A|U|1406
8ZEJ|1|A|C|1407
*
8ZEJ|1|A|G|1494
8ZEJ|1|A|U|1495
8ZEJ|1|A|C|1496
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- Small ribosomal subunit protein uS12
- Chain Z
- Transfer RNA; tRNA
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain x
- mRNA
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