IL_8ZEJ_076
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZEJ_076 not in the Motif Atlas
- Geometric match to IL_5J7L_250
- Geometric discrepancy: 0.0931
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
8ZEJ|1|b|G|188
8ZEJ|1|b|G|189
8ZEJ|1|b|A|190
8ZEJ|1|b|A|191
8ZEJ|1|b|C|192
8ZEJ|1|b|U|193
8ZEJ|1|b|G|194
*
8ZEJ|1|b|C|201
8ZEJ|1|b|U|202
8ZEJ|1|b|A|203
8ZEJ|1|b|A|204
8ZEJ|1|b|G|205
8ZEJ|1|b|U|206
8ZEJ|1|b|A|207
8ZEJ|1|b|C|208
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain m
- 50S ribosomal protein L15
Coloring options: