IL_8ZEJ_088

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

8ZEJ|1|b|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZEJ_088 not in the Motif Atlas

Geometric match to IL_7A0S_017

Geometric discrepancy: 0.1066

The information below is about IL_7A0S_017

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

8ZEJ|1|b|U|702
8ZEJ|1|b|U|703
*
8ZEJ|1|b|G|728
8ZEJ|1|b|G|729
8ZEJ|1|b|A|730

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2