IL_8ZEJ_090

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GACU*AGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZEJ_090 not in the Motif Atlas

Geometric match to IL_8P9A_386

Geometric discrepancy: 0.3247

The information below is about IL_8P9A_386

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

24

Unit IDs

8ZEJ|1|b|G|738
8ZEJ|1|b|A|739
8ZEJ|1|b|C|740
8ZEJ|1|b|U|741
*
8ZEJ|1|b|A|756
8ZEJ|1|b|G|757
8ZEJ|1|b|C|758

Current chains

Chain b

23S rRNA

Nearby chains