IL_8ZEJ_156

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GGAGG*CGACCUUGAAAUAC

Length

19 nucleotides

Bulged bases

8ZEJ|1|b|A|2163

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|G|2124
8ZEJ|1|b|G|2125
8ZEJ|1|b|A|2126
8ZEJ|1|b|G|2127
8ZEJ|1|b|G|2128
*
8ZEJ|1|b|C|2161
8ZEJ|1|b|G|2162
8ZEJ|1|b|A|2163
8ZEJ|1|b|C|2164
8ZEJ|1|b|C|2165
8ZEJ|1|b|U|2166
8ZEJ|1|b|U|2167
8ZEJ|1|b|G|2168
8ZEJ|1|b|A|2169
8ZEJ|1|b|A|2170
8ZEJ|1|b|A|2171
8ZEJ|1|b|U|2172
8ZEJ|1|b|A|2173
8ZEJ|1|b|C|2174

Current chains

Chain b

23S rRNA

Nearby chains

Chain X

Transfer RNA; tRNA