IL_8ZEJ_158

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CUUUGAAGUGUGGA*UCUGCAUGGAG

Length

25 nucleotides

Bulged bases

8ZEJ|1|b|U|2132, 8ZEJ|1|b|G|2133, 8ZEJ|1|b|G|2157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|C|2129
8ZEJ|1|b|U|2130
8ZEJ|1|b|U|2131
8ZEJ|1|b|U|2132
8ZEJ|1|b|G|2133
8ZEJ|1|b|A|2134
8ZEJ|1|b|A|2135
8ZEJ|1|b|G|2136
8ZEJ|1|b|U|2137
8ZEJ|1|b|G|2138
8ZEJ|1|b|U|2139
8ZEJ|1|b|G|2140
8ZEJ|1|b|G|2141
8ZEJ|1|b|A|2142
*
8ZEJ|1|b|U|2149
8ZEJ|1|b|C|2150
8ZEJ|1|b|U|2151
8ZEJ|1|b|G|2152
8ZEJ|1|b|C|2153
8ZEJ|1|b|A|2154
8ZEJ|1|b|U|2155
8ZEJ|1|b|G|2156
8ZEJ|1|b|G|2157
8ZEJ|1|b|A|2158
8ZEJ|1|b|G|2159

Current chains

Chain b

23S rRNA

Nearby chains

Chain K

Small ribosomal subunit protein uS11