IL_8ZFG_051
3D structure
- PDB id
- 8ZFG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.68 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZFG_051 not in the Motif Atlas
- Geometric match to IL_8B0X_052
- Geometric discrepancy: 0.0755
- The information below is about IL_8B0X_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8ZFG|1|A|C|1158
8ZFG|1|A|U|1159
8ZFG|1|A|G|1160
8ZFG|1|A|C|1161
*
8ZFG|1|A|G|1175
8ZFG|1|A|A|1176
8ZFG|1|A|G|1177
8ZFG|1|A|G|1178
8ZFG|1|A|A|1179
8ZFG|1|A|A|1180
8ZFG|1|A|G|1181
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- Small ribosomal subunit protein uS2
- Chain I
- Small ribosomal subunit protein uS9
Coloring options: