IL_8ZFG_097
3D structure
- PDB id
- 8ZFG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.68 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8ZFG|1|a|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZFG_097 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.0832
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
8ZFG|1|a|C|998
8ZFG|1|a|U|999
8ZFG|1|a|A|1000
8ZFG|1|a|A|1001
8ZFG|1|a|G|1002
*
8ZFG|1|a|C|1153
8ZFG|1|a|G|1154
8ZFG|1|a|A|1155
8ZFG|1|a|A|1156
8ZFG|1|a|G|1157
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
- Chain y
- Large ribosomal subunit protein uL30
Coloring options: